HCSGD entry for ABCC5
1. General information
| Official gene symbol | ABCC5 |
|---|---|
| Entrez ID | 10057 |
| Gene full name | ATP-binding cassette, sub-family C (CFTR/MRP), member 5 |
| Other gene symbols | ABC33 EST277145 MOAT-C MOATC MRP5 SMRP pABC11 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0006810 | Transport | TAS | biological_process |
| GO:0006820 | Anion transport | TAS | biological_process |
| GO:0008514 | Organic anion transmembrane transporter activity | TAS | molecular_function |
| GO:0015711 | Organic anion transport | TAS | biological_process |
| GO:0016020 | Membrane | IDA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0030212 | Hyaluronan metabolic process | TAS | biological_process |
| GO:0030213 | Hyaluronan biosynthetic process | TAS | biological_process |
| GO:0034220 | Ion transmembrane transport | TAS | biological_process |
| GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEA | molecular_function |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0161296113 | 0.9440750313 | 0.3129757553 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1481489623 |
| GSE13712_SHEAR | Down | -0.0829470269 |
| GSE13712_STATIC | Up | 0.2352211126 |
| GSE19018 | Down | -0.3398342345 |
| GSE19899_A1 | Up | 0.2704165858 |
| GSE19899_A2 | Up | 0.6166470458 |
| PubMed_21979375_A1 | Down | -0.0024292817 |
| PubMed_21979375_A2 | Up | 0.8686380138 |
| GSE35957 | Up | 0.2562389232 |
| GSE36640 | Up | 1.1907722487 |
| GSE54402 | Up | 0.3173782438 |
| GSE9593 | Down | -0.2288907358 |
| GSE43922 | Up | 0.8775570847 |
| GSE24585 | Up | 0.2827689164 |
| GSE37065 | Down | -0.0039638277 |
| GSE28863_A1 | Up | 0.4111886707 |
| GSE28863_A2 | Up | 0.5531991326 |
| GSE28863_A3 | Down | -0.4380605174 |
| GSE28863_A4 | Down | -0.1410474449 |
| GSE48662 | Up | 0.1737211052 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027512 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-1229-3p | MIMAT0005584 | MIRT036328 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-935 | MIMAT0004978 | MIRT036666 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-423-5p | MIMAT0004748 | MIRT038057 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-188-5p | MIMAT0000457 | MIRT044899 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
