HCSGD entry for TROAP
1. General information
| Official gene symbol | TROAP |
|---|---|
| Entrez ID | 10024 |
| Gene full name | trophinin associated protein |
| Other gene symbols | TASTIN |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0007155 | Cell adhesion | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9769033813 | 0.0008991072 | 0.9999902473 | 0.0566338902 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3612781704 |
| GSE13712_SHEAR | Down | -0.2731385658 |
| GSE13712_STATIC | Down | -1.2408401612 |
| GSE19018 | Up | 0.1861340193 |
| GSE19899_A1 | Down | -0.7704667446 |
| GSE19899_A2 | Down | -1.7115981931 |
| PubMed_21979375_A1 | Down | -0.7311383998 |
| PubMed_21979375_A2 | Down | -2.4261957645 |
| GSE35957 | Down | -1.5965745899 |
| GSE36640 | Down | -2.9752965205 |
| GSE54402 | Down | -0.6615135663 |
| GSE9593 | Down | -0.8695809555 |
| GSE43922 | Down | -0.2146448809 |
| GSE24585 | Up | 0.0019517511 |
| GSE37065 | Down | -0.2503032068 |
| GSE28863_A1 | Down | -0.1271401635 |
| GSE28863_A2 | Up | 0.4593959778 |
| GSE28863_A3 | Up | 0.0679974128 |
| GSE28863_A4 | Up | 0.2473777749 |
| GSE48662 | Down | -0.9419398672 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024690 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026899 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039703 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042226 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
