HCSGD entry for TMEM170B
1. General information
| Official gene symbol | TMEM170B |
|---|---|
| Entrez ID | 100113407 |
| Gene full name | transmembrane protein 170B |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0436598306 | 0.2333316515 | 0.4654396112 | 0.9303593821 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0005160986 |
| GSE13712_SHEAR | Down | -0.3752394192 |
| GSE13712_STATIC | Down | -0.6378449720 |
| GSE19018 | Down | -0.8281537081 |
| GSE19899_A1 | Up | 0.1199624097 |
| GSE19899_A2 | Up | 0.5272031623 |
| PubMed_21979375_A1 | Up | 0.3718528153 |
| PubMed_21979375_A2 | Up | 0.9521484294 |
| GSE35957 | Up | 1.1932931288 |
| GSE36640 | Up | 1.7683950355 |
| GSE54402 | Down | -0.0531110290 |
| GSE9593 | Up | 0.1630663068 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Down | -0.3398945319 |
| GSE28863_A2 | Up | 1.3314015551 |
| GSE28863_A3 | Down | -0.8453495391 |
| GSE28863_A4 | Up | 0.0340226756 |
| GSE48662 | Up | 0.0348294738 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018133 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT022096 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-101-3p | MIMAT0000099 | MIRT027363 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-27a-3p | MIMAT0000084 | MIRT028738 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-484 | MIMAT0002174 | MIRT041741 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
